More funding for Lung Research: The Kayla Baker Award

Last year I had the incredible honour of winning the Pfizer-Lung Association award (+Canadian Lung Association ) research award for my work on preventing pneumonia in older adults. I got to attend the Breathe Gala, a major fundraising effort for the Ontario Lung Association. I was absolutely humbled to be standing beside these three women, Helene Campbell, double lung transplant recipient and idiopathic pulmonary fibrosis patient, Ann Marie Cerato, lung cancer survivor and Kayla Baker who had pulmonary fibrosis and at that time was waiting for a lung transplant. These woman who had or were battling incredibly devastating lung disease were there with a common message “More money for lung research”. I really couldn’t believe how selfless they were, as they were well aware of how slow basic research can be, and how they might not see changes in their lifetime. They knew, as all of us in lung health know, that lung research is underfunded, especially when one considers how much the economic and personal costs are and were using their voices and stories to rally the cause and without more funding health outcomes for people with pulmonary fibrosis, lung cancer or lung infections would be grim. I was inspired by them and have tried my best to take up the cause and become an advocate for lung health.

Dawn standing beside the real heros of the event, Helene Campbell, double lung transplant recipient and idiopathic fibrosis patient, Ann Marie Cerato, lung cancer survivor and Kayla Baker sarcoidosis patient waiting for a lung transplant.

Dawn standing beside the real heros of the event, Helene Campbell, double lung transplant recipient and idiopathic fibrosis patient, Ann Marie Cerato, lung cancer survivor and Kayla Baker sarcoidosis patient waiting for a lung transplant.

I think the whole lung family was devastated when Kayla passed away last year and inspired by her mother Susan’s commitment to continue raising money for lung research.

Below is a bit about Kayla’s story and a link to fund a research award in her name. I was proud to donate and I hope you will consider it to, even $5 or $10 dollars will add up and send Kayla’s message “More funding for lung research.”

About Kayla

Kayla Baker was a true lung warrior…through her unwavering commitment to building awareness of the importance of lung research.

Kayla Baker was diagnosed with Pulmonary Fibrosis, a rare lung disease at the age of 11. This disease is the consequence of chemotherapy she received when she battled cancer, starting at the age of 18 months old. This is when Kayla began a long relationship with SickKids Hospital, becoming a young ambassador for the hospital, helping to generate awareness for organ donation and the need for improvements in medical research and patient care.

A couple years later, we were privileged at the OLA to have Kayla and her mother Susan enter our lives. Kayla became a true lung champion, committing to the cause and speaking publicly about her condition and the need for greater investments in lung research. More recently, Kayla and her mother were featured in a successful national direct mail campaign. She never tired of speaking out on her fight for life in the hopes of helping others. And when Kayla spoke, people listened.

Sadly, Kayla passed away this past Christmas. She leaves behind a memory for all those who have known her of a young girl that personified courage and bravery…and someone that continues to inspire and generate hope.

The Kayla Baker Research Award is being established in her memory.

http://breathingasone.kintera.org/faf/donorReg/donorPledge.asp?supId=0&ievent=1109594&lis=1&kntae1109594=8C885C032AC34294BA69FD22C8CED225&team=

“Comprehensive & simultaneous coverage of lipid and polar metabolites for endogenous cellular metabolomics using HILIC-TOF-MS” 2014. Fei et al. Anal Bioanal Chem.

 

Bowdish-McCarry PhD candidate, Fan Fei, publishes a protocol she created to study the endometabolome of macrophages and microbes in Analytical & Bioanalytical Chemistry. Click the image for the .pdf.
Fei 2014 covershot ABC

Catherine Bowman cleans up at the 2014 Bay Area Science and Engineering Fair!

Catherine Bowman, a grade 10 student from St. Mary’s Catholic Secondary in Hamilton, joined the Bowdish lab under the mentorship of Avee Naidoo (MSc candidate) and Kyle Novakowski (MSc student) recently to work on a project entitled “The Effects of Apigenin, Diosmetin and Chicoric Acid on TNF-Alpha and COX-2 Levels of Stimulated RAW 264.7 Macrophages.”

She received a number of awards including a BASEF gold medal, Cancer Assistance Programme Award – First, Hillfield Strathallan College Awards of Excellence- Biological Sciences Award, Hamilton Association da Vinci Award, Drs. Ranjan Sur and Monalisa Sur Award, Pinnacle Best in Fair and the ArcelorMittal Dofasco Pinnacle best-in-fair award at the Bay Area Science and Engineering Fair for her project. She’ll be presenting her work at Canada-wide and the International Science Fair!

To read the article from the Hamilton Spectator, click here.

Catherine Bowman beside her award winning poster (BASEF, March 2014).

Catherine Bowman beside her award winning poster (BASEF, March 2014).

Funding from the province of Ontario supports two new graduate students!

Bowdish lab receives funding from the province of  Ontario to train two new graduate students! Avee Naidoo (MSc) and Dessi Loukov, who will be starting a PhD in Sept 2013,  will be studying how age-associated inflammation predisposes older adults to pneumonia.

For full details on the award for Dawn’s proposal “Interplay between inflammation and impaired anti-bacterial immunity in the elderly.”
http://iidr.mcmaster.ca/IIDR-news/ERAs-2014.html#.UzXGj_ldWSo

Dessi Loukov, pictured here pushing back the boundaries of science.

Dessi Loukov, pictured here pushing back the boundaries of science.

Aveshni Naidoo, MSc sits beside the coolest jack-o'-lantern ever.

Aveshni Naidoo, MSc sits beside the coolest jack-o’-lantern ever.

Whelan et al. The Loss of Topography in the Microbial Communities of the Upper Respiratory Tract in the Elderly. Ann Am Thorac Soc. 2014 Mar 6.

Whelan FJ, Verschoor CP, Stearns JC, Rossi L, Luinstra K, Loeb M, Smieja M, Johnstone J, Surette MG, Bowdish DM. The Loss of Topography in the Microbial Communities of the Upper Respiratory Tract in the Elderly. Ann Am Thorac Soc. 2014 Mar 6.

This paper describes how the microbial communities of the anterior nares and nasopharynx change between adults and the elderly. 

Dawn Bowdish & Chad Steele elected Vice Chairs for the 2016 Gordon conference on Acute Respiratory Infections!

I  attended the Gordon conference on “Acute Respiratory Infections” in Barga, Italy. It was an exceptional meeting, with lots of great science and surprisingly I was elected with Chad Steele to be vice-chairs of the 2016 conference and chairs of the 2018 conference! I’m really excited to be part of this amazing group of researchers. Look how enthusiastic Chad & I are. 2016 is in Galveston, Texas & one of my goals is to have that place swimming with Canadians. It would be almost impossible to match the quality of this year’s conference but Chad and I will certainly do our best.

Dawn Bowdish & Chad Steele are excited to be elected Vice Chairs of the 2016 Gordon conference on Acute Respiratory Infections and Chairs of the 2018 meeting!

Dawn Bowdish & Chad Steele are excited to be elected Vice Chairs of the 2016 Gordon conference on Acute Respiratory Infections and Chairs of the 2018 meeting!

For a photo of all the attendees at the conference – click here -> grcphoto_2014_bioacute

PradhuDas et al. Standardizing Scavenger Receptor Nomenclature. J Immunol. 2014 Mar 1;192(5):1997-2006.

PrabhuDas M, Bowdish D, Drickamer K, Febbraio M, Herz J, Kobzik L, Krieger M, Loike J, Means TK, Moestrup SK, Post S, Sawamura T, Silverstein S, Wang XY, El Khoury J. Standardizing scavenger receptor nomenclature. J Immunol. 2014 Mar 1;192(5):1997-2006. doi: 10.4049/jimmunol.1490003.

PradhuDas et al screen shot

Puchta et al. Characterization of inflammatory responses during intranasal colonization with Streptococcus pneumoniae. Vis Exp. 2014 Jan 17;(83):e50490. doi: 10.3791/50490.

Puchta A, Verschoor CP, Thurn T, Bowdish DMCharacterization of inflammatory responses during intranasal colonization with Streptococcus pneumoniae. J Vis Exp. 2014 Jan 17;(83):e50490. doi: 10.3791/50490.

A guide to Bioinformatics for Immunologists

Congratulations to Fiona Whelan (MSc, Bowdish lab; PhD student, Surette lab) for publishing the review article “A guide to bioinformatics for immunologists” in Frontiers Immunology. The idea of this article spawned from the research that Fiona conducted in the Bowdish lab on the elucidation of the evolutionary history and relationships between the members of the class A scavenger receptors, proteins required for host defense and homeostasis. During this time, Fiona used multiple bioinformatic techniques and tools to form hypotheses as to the function of one under-annotated member of this family, SCARA3.  Even though most of these tools are easy-to-use and require little computational knowledge, Fiona and Dawn discovered through their interactions with other immunologists that these tools were being under utilized.  Thus, they decided to write a review of how bioinformatic techniques can help the average immunologist in their quest for knowledge about the structure of their protein of interest, how to find SNPs that may correlate with disease phenotype, and how to conduct sequence alignments in order to find areas that are conserved across various genes.

This review article is written as a case study that follows Fiona’s research into SCARA3 that begins with obtaining the NCBI Reference FASTA sequence of the protein, predicting post-translational modifications, identifying conserved motifs, hypothesizing as to the structure of the protein, examining SCARA3’s transcriptomic profile in different immunological cell types, and analyzing any potential SNPs within the DNA sequence of SCARA3 that may correlate with disease. The article is written with the immunologist in mind and includes the use of only “point and click” tools that require no computational background whatsoever.

Is Fiona’s paper is Open Access? Of course it is! Enjoy reading it here and reading the description on the Surette lab website here.

The laboratories of both Dr. Bowdish and Dr. Surette are always interested in undergraduate and graduate students interested in exploring the impact bioinformatics can have on immunological and microbiological research.